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How could we forget about the makeup bag?
Joke aside, the access badge can be revoked immediately (unless Elon somehow fucked that up too). Locks can be changed (and she can probably have that done quickly by a security detail as well as a sweep of the apartment). Blank checks can be canceled at the bank (basically a bulk stop payment on the range of check numbers).
Passport may be a bigger concern, but for someone in a cabinet-level position, anyone attempting to use it would probably be questioned pretty thoroughly.
Elon Musky definitely fucked it up.